Flatnic

Linux · Office & Productivity

Alexandria

Personal library of scientific PDFs

by Paul Emsley

Download

Official site: flathub.org

About Alexandria

Alexandria is a application for managing a local store of scientific papers.

Typically starting with a directory of PDFs, it extracts metadata (title,

authors, year, DOI, journal) from the text of the PDF, consults CrossRef and

OpenAlex, then presents a searchable, filterable card browser.

Alexandria tries to make it easy to find and add related papers.

Full-text search across title, authors, abstract, DOI and journal

Citation counts and per-year sparklines from OpenAlex

Built-in PDF viewer with highlight and comment annotations,

and click-through citation links that jump to the reference

A viewer sidebar with the paper's table of contents, page

thumbnails and your highlights

Structured full text (JATS XML) fetched from Europe PMC and

stored beside the PDF

Authors window: a persistent trail of the authors you follow,

with their works, collaborators, funding and affiliation history

Journal and topic subscriptions, flagging new papers by

authors you have looked up before

BibTeX, RIS and CSL export; BibTeX and DOI import

Preprint detection (arXiv, bioRxiv, chemRxiv and more)

Duplicate detection by DOI and file hash, with supporting

How to install Alexandria

  1. Click Download — the developer's official website opens in a new tab.
  2. Download the latest version there and run it. Choose Custom/Advanced where offered, and skip any bundled extras.
  3. Prefer the command line? With Flatpak you can install and update it with: flatpak install flathub io.github.pemsley.Alexandria
  4. Open Alexandria once it finishes installing.
How to install Linux apps with Flatpak

Frequently asked questions

Is Alexandria free to download?

Yes. The Download button sends you to flathub.org, the developer's official site, where Alexandria is available to download. Flatnic doesn't host or modify any files.

How do I install Alexandria from the command line?

With Flatpak, run: flatpak install flathub io.github.pemsley.Alexandria. This installs it from the official source and keeps it updated.

Is Alexandria safe?

Alexandria downloads directly from the developer. As always, scan the installer with your antivirus and choose Custom setup to skip any bundled extras.

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